Managing Ontologies in OntoPortal
The OntoPortal Virtual Appliance comes with a few example ontologies already installed.
You are expected to populate the site with the ontologies that interest you.
We provide
general ontology submission instructions using different techniques.
There are separate sections for specialized cases like
handling UMLS ontologies and
copying ontologies from other repositories.
We describe how to
manage ontologies for the user(s) of your repository,
including understanding the
ontology log files created by the system.
OntoPortal uses OWLAPI and can ingest
most ontologies that OWLAPI can parse.
However, there are some additional constraints, and we address those in our sections
on
limitations and
troubleshooting submissions.
How to submit ontology files to your repository
How to copy ontologies from another OntoPortal-based repository to your repository
How to submit UMLS content to your repository
How to manage access to your repository's ontologies
How to manage your repository's ontologies
The types of ontologies that OntoPortal can handle
Kinds of ontologies that OntoPortal can't handle
Figuring out why your submission didn't work